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Aliases : Zm00001e030652
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 180.0)
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e030652_P001 | |
| Cluster | HCCA: Cluster_170 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00036p00067000 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00200350 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00185510 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| AT3G13224 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G14300 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G40490 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g013860 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060246 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g081638 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102181 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g112695 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116756 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g19414 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13552 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g35979 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02499 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08511 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08530 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19166 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g24129 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26133 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g64152 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16236 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08667 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g10341 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene42378.t2 | Aspi01Gene42378 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008091 | No alias | not classified & original description: CDS=1-1311 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013740 | No alias | not classified & original description: CDS=1-1461 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0024.g020434 | No alias | not classified & original description: CDS=421-1668 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0149.g053226 | No alias | not classified & original description: CDS=547-1935 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0195.g057243 | No alias | not classified & original description: CDS=263-1516 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02546 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g09256 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g09693 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g61818 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G042300.1 | Ceric.04G042300 | not classified & original description: pacid=50630995... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G066500.1 | Ceric.12G066500 | not classified & original description: pacid=50602160... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G061100.1 | Ceric.19G061100 | not classified & original description: pacid=50575703... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G060600.1 | Ceric.35G060600 | not classified & original description: pacid=50581737... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g01601 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15425 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21405 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g31601 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15384 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03669 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03771 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04644 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07789 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16051 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16526 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g17151 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012784001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01028394001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| Gb_04294 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_33485 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_35079 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g12850.1 | LOC_Os02g12850 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os10g33230.1 | LOC_Os10g33230 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.15 | OrthoFinder output from all 47 species | |
| Len_g09242 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09670 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13554 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g17314 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22115 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g32654 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04078 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06009 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g10917 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12062 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432683g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_125759g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_141102g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_473g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_68291g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05437 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00898 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02394 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43133 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19415 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19973 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g31234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g00523 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g05992 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g09717 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g11176 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g17780 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g20108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20248 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10456 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000411 | No alias | not classified & original description: CDS=1-1413 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0054.g014264 | No alias | not classified & original description: CDS=1-1203 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15340 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50608 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo101375 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g093340.3.1 | Solyc02g093340 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc03g005680.3.1 | Solyc03g005680 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.13 | OrthoFinder output from all 47 species | |
| Solyc03g121710.2.1 | Solyc03g121710 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g045240.3.1 | Solyc07g045240 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.13 | OrthoFinder output from all 47 species | |
| Solyc09g090520.3.1 | Solyc09g090520 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07882 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01925 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g04541 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g07867 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08507 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |