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  5. Zm00001e030621_P001

Zm00001e030621_P001 (ATSYP124, SYP124,...)


Aliases : ATSYP124, SYP124, Zm00001e030621

Description : SYP1-group Qa-type SNARE component


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030621_P001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00136390 ATSYP124,... Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.02 OrthoFinder output from all 47 species
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.03 OrthoFinder output from all 47 species
Aev_g10371 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aev_g20482 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Dde_g43398 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
GSVIVT01006716001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
GSVIVT01030578001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
LOC_Os06g07200.1 SYP132,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
LOC_Os06g39050.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Lfl_g03028 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Nbi_g06104 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g17925 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Solyc12g005580.2.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Tin_g28595 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 242 293
IPR006011 Syntaxin_N 35 240
No external refs found!