LOC_Os03g64260 (Os03g0860100)


Aliases : Os03g0860100

Description : 17.5.2 hormone metabolism.ethylene.signal transduction encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein ?//CONTAINS one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g64260
Cluster HCCA cluster: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
MA_40048g0010 No alias No description available 0.03 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.03 Gene family
Solyc11g006050.1.1 Solyc11g006050.1 No description available 0.02 Gene family
Zm00001d008872 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d019096 GRMZM2G379652 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 80 129
No external refs found!