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  5. Zm00001e030504_P002

Zm00001e030504_P002 (Zm00001e030504)


Aliases : Zm00001e030504

Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 108.0)


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030504_P002

Target Alias Description ECC score Gene Family Method Actions
Ala_g13837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39058 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Lfl_g06487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429182g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022907 No alias not classified & original description: CDS=590-1630 0.02 OrthoFinder output from all 47 species
Zm00001e015636_P001 Zm00001e015636 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 36 91
No external refs found!