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  5. Zm00001e030477_P001

Zm00001e030477_P001 (Zm00001e030477)


Aliases : Zm00001e030477

Description : ubiquitin ligase component Doa10 of ER-associated protein degradation (ERAD) machinery


Gene families : OG0001940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030477_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G34100 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g104776 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Aev_g27804 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species
Dcu_g03181 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
GSVIVT01031710001 No alias Protein degradation.ER-associated protein degradation... 0.04 OrthoFinder output from all 47 species
Gb_37944 No alias ubiquitin ligase component Doa10 of ER-associated... 0.03 OrthoFinder output from all 47 species
LOC_Os06g43210.1 LOC_Os06g43210 ubiquitin ligase component Doa10 of ER-associated... 0.08 OrthoFinder output from all 47 species
Ore_g38212 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.04 OrthoFinder output from all 47 species
Pir_g20401 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.04 OrthoFinder output from all 47 species
Pnu_g32909 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 35 81
No external refs found!