Zm00001e030385_P001 (Zm00001e030385)

Aliases : Zm00001e030385

Description : tRNA pseudouridine synthase (TruA). receptor-like protein kinase (RLCK-VIIa)

Gene families : OG0000017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e030385_P001

Target	Alias	Description	ECC score	Gene Family Method
Aev_g01238	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aob_g06695	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Azfi_s0008.g011588	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g29591	APK1, APK1A	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Dde_g02773	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Dde_g50991	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
LOC_Os05g03460.1	LOC_Os05g03460	receptor-like protein kinase (RLCK-VIIa)	0.03	OrthoFinder output from all 47 species
Pnu_g16951	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015396	No alias	not classified & original description: CDS=382-894	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	IEA	Interproscan
MF	GO:0009982	pseudouridine synthase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	73	255
IPR020097	PsdUridine_synth_TruA_a/b_dom	590	672

External Links

No external refs found!

Zm00001e030385_P001 (Zm00001e030385)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation