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Aliases : HCF136, Zm00001e030125
Description : HCF136 protein involved in PS-II assembly
Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00083110 | HCF136,... | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder output from all 47 species | |
| AT5G23120 | HCF136 | photosystem II stability/assembly factor, chloroplast (HCF136) | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g023753 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g35613 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g31805 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g23347 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g06472 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g09964 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012492 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19514 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.10G037400.1 | HCF136, Ceric.10G037400 | protein involved in PS-II assembly *(HCF136) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Cre06.g273700 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14607 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01147 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g00586 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g20509 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01012045001 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_03750 | HCF136 | HCF136 protein involved in PS-II assembly | 0.05 | OrthoFinder output from all 47 species | |
| Len_g11400 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g02953 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| MA_10433328g0010 | HCF136 | HCF136 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g23900.1 | HCF136 | HCF136 protein involved in PS-II assembly | 0.14 | OrthoFinder output from all 47 species | |
| Msp_g03512 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g14696 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g40589 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g10204 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g05859 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g00841 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009047 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g07654 | No alias | protein involved in PS-II assembly *(HCF136) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g014150.4.1 | HCF136, Solyc02g014150 | HCF136 protein involved in PS-II assembly | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g12995 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g11749 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028203 | PSII_CF48-like_dom | 72 | 392 |
| No external refs found! |