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  5. Zm00001e029882_P001

Zm00001e029882_P001 (Zm00001e029882)


Aliases : Zm00001e029882

Description : LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica (sp|q658i5|lmbd1_orysj : 741.0)


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029882_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G01460 No alias LMBR1-like membrane protein 0.04 OrthoFinder output from all 47 species
Aev_g02363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G014800.1 Ceric.34G014800 not classified & original description: pacid=50622851... 0.06 OrthoFinder output from all 47 species
Cre01.g023400 No alias LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Dcu_g05623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033959001 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
MA_10078g0020 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g11896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75198 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g01896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 271 490
IPR006876 LMBR1-like_membr_prot 9 279
No external refs found!