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Aliases : Zm00001e029280
Description : Uncharacterized protein At4g37920 OS=Arabidopsis thaliana (sp|q84wn0|y4920_arath : 404.0)
Gene families : OG0002549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002549_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e029280_P001 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G36320 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G37920 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30042.t1 | Aspi01Gene30042 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0060.g034818 | No alias | not classified & original description: CDS=53-1405 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01017 | No alias | regulatory factor *(RP8) of RNA polymerase RpoA activity... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G022600.1 | Ceric.01G022600 | not classified & original description: pacid=50591478... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G023200.1 | Ceric.23G023200 | not classified & original description: pacid=50611197... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06849 | No alias | regulatory factor *(RP8) of RNA polymerase RpoA activity... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003846001 | No alias | Uncharacterized protein At4g37920 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01008964001 | No alias | Uncharacterized protein At4g37920 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g20110.1 | LOC_Os01g20110 | Uncharacterized protein At4g37920 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| MA_77650g0010 | No alias | Uncharacterized protein At4g37920 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Mp6g13740.1 | No alias | Uncharacterized protein At4g37920 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g00559 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12616 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008297 | No alias | not classified & original description: CDS=1-1491 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017048 | No alias | not classified & original description: CDS=50-1423 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30268 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo77953 | No alias | Uncharacterized protein At4g37920 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g091640.3.1 | Solyc02g091640 | Uncharacterized protein At4g37920 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g072400.4.1 | Solyc04g072400 | Uncharacterized protein At4g37920 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04497 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g20450 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |