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  5. AMTR_s00057p00193080

AMTR_s00057p00193080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.217

Description : Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor


Gene families : OG_01_0001775 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001775_tree ,
OG_02_0009431 (LandPlants) Phylogenetic Tree(s): OG_02_0009431_tree ,
OG_03_0010699 (SeedPlants) Phylogenetic Tree(s): OG_03_0010699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00193080
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G62910 APG3 Peptide chain release factor 1 0.04 Archaeplastida
Cre16.g673617 No alias Protein biosynthesis.organelle translation... 0.06 Archaeplastida
GSVIVT01010979001 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
LOC_Os11g43600.1 No alias PrfA-type translation peptide chain release factor 0.11 Archaeplastida
Mp5g08280.1 No alias PrfA-type translation peptide chain release factor 0.03 Archaeplastida
Pp3c7_80V3.1 No alias Peptide chain release factor 1 0.1 Archaeplastida
Smo141857 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Smo438470 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Solyc09g074650.3.1 No alias PrfA-type translation peptide chain release factor 0.04 Archaeplastida
Zm00001e021069_P003 No alias PrfA-type translation peptide chain release factor 0.05 Archaeplastida
AT3G62910 APG3 Peptide chain release factor 1 0.04 LandPlants
GSVIVT01010979001 No alias Protein biosynthesis.organelle translation... 0.05 LandPlants
LOC_Os11g43600.1 No alias PrfA-type translation peptide chain release factor 0.1 LandPlants
Mp5g08280.1 No alias PrfA-type translation peptide chain release factor 0.03 LandPlants
Pp3c7_80V3.1 No alias Peptide chain release factor 1 0.08 LandPlants
Smo141857 No alias Protein biosynthesis.organelle translation... 0.03 LandPlants
Solyc09g074650.3.1 No alias PrfA-type translation peptide chain release factor 0.03 LandPlants
Zm00001e021069_P003 No alias PrfA-type translation peptide chain release factor 0.04 LandPlants
AT3G62910 APG3 Peptide chain release factor 1 0.04 SeedPlants
GSVIVT01010979001 No alias Protein biosynthesis.organelle translation... 0.05 SeedPlants
LOC_Os11g43600.1 No alias PrfA-type translation peptide chain release factor 0.08 SeedPlants
Solyc09g074650.3.1 No alias PrfA-type translation peptide chain release factor 0.02 SeedPlants
Zm00001e021069_P003 No alias PrfA-type translation peptide chain release factor 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006415 translational termination IEA Interproscan
MF GO:0016149 translation release factor activity, codon specific IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 258 369
IPR005139 PCRF 114 227
No external refs found!