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  5. Zm00001e029191_P001

Zm00001e029191_P001 (Zm00001e029191)


Aliases : Zm00001e029191

Description : Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana (sp|q7xa78|d27_arath : 124.0)


Gene families : OG0001572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029191_P001
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.06 OrthoFinder output from all 47 species
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g033681 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02991 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06641 No alias carotenoid isomerase *(DWARF27) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11103 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g00455 No alias carotenoid isomerase *(DWARF27) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19690 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008838 No alias carotenoid isomerase *(DWARF27) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g00750 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G115700.1 Ceric.02G115700 carotenoid isomerase *(DWARF27) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g13831 No alias carotenoid isomerase *(DWARF27) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02296 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019663001 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.04 OrthoFinder output from all 47 species
Gb_18729 No alias carotenoid isomerase (DWARF27) 0.03 OrthoFinder output from all 47 species
LOC_Os08g02210.2 LOC_Os08g02210 Beta-carotene isomerase D27, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g16141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11491 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_167711g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g16410.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g26733 No alias carotenoid isomerase *(DWARF27) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19910 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09207 No alias carotenoid isomerase *(DWARF27) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g26521 No alias carotenoid isomerase *(DWARF27) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62487 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g008630.4.1 Solyc08g008630 Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.04 OrthoFinder output from all 47 species
Spa_g05404 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28773 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR025114 D27-like_C 213 295
No external refs found!