LOC_Os03g62200 (Os03g0838400)

Aliases : Os03g0838400

Description : 34.5 transport.ammonium encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2 (AMT2)

Gene families : OG_01_0000580 (Gene family) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): LOC_Os03g62200
Cluster	HCCA cluster: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01022402001	No alias	34.5 transport.ammonium encodes a high-affinity ammonium...	0.03	Gene family
GSVIVT01030328001	No alias	34.5 transport.ammonium encodes a high-affinity ammonium...	0.02	Gene family
LOC_Os02g34580	Os02g0550800	34.5 transport.ammonium encodes a high-affinity ammonium...	0.05	Gene family
MA_10433341g0010	No alias	34.5 transport.ammonium encodes a high-affinity ammonium...	0.03	Gene family
MA_67604g0010	No alias	34.5 transport.ammonium encodes a high-affinity ammonium...	0.02	Gene family
Smo173475	PACid_15414940	No description available	0.02	Gene family
Solyc09g065740.2.1	Solyc09g065740.2	34.5 transport.ammonium encodes a high-affinity ammonium...	0.02	Gene family
Solyc10g076480.2.1	Solyc10g076480.2	34.5 transport.ammonium encodes a high-affinity ammonium...	0.02	Gene family
Zm00001d012261	GRMZM2G335218	34.5 transport.ammonium encodes a high-affinity ammonium...	0.02	Gene family
Zm00001d034782	GRMZM2G338809,...	34.5 transport.ammonium encodes a high-affinity ammonium...	0.09	Gene family
Zm00001d038412	GRMZM2G080045	34.5 transport.ammonium encodes a high-affinity ammonium...	0.04	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008519	ammonium transmembrane transporter activity	IEA	InterProScan
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
BP	GO:0015696	ammonium transport	IEA	InterProScan
CC	GO:0016020	membrane	IEA	InterProScan
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR024041	NH4_transpt_AmtB-like_dom	30	454

External Links

No external refs found!

LOC_Os03g62200 (Os03g0838400)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation