Zm00001e028882_P001 (ARF1A1C, Zm00001e028882)

Aliases : ARF1A1C, Zm00001e028882

Description : ARF-GTPase

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e028882_P001

Target	Alias	Description	ECC score	Gene Family Method
Len_g03591	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g05534	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Smo100907	ATARFB1C, ARFB1C	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	7	177

External Links

No external refs found!