LOC_Os03g61990 (Os03g0836200)


Aliases : Os03g0836200

Description : 27.4 RNA.RNA binding Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. ATRZ-1A


Gene families : OG_01_0000053 (Gene family) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g61990
Cluster HCCA cluster: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT1G60650 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 Gene family
AT1G74230 GR-RBP5 glycine-rich RNA-binding protein 5 0.03 Gene family
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 Gene family
Cre17.g729150 No alias No description available 0.02 Gene family
GSVIVT01001672001 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.02 Gene family
LOC_Os01g74340 Os01g0974701 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.03 Gene family
LOC_Os08g04440 Os08g0139000 27.4 RNA.RNA binding RNA-binding (RRM/RBD/RNP motifs)... 0.04 Gene family
Smo81392 PACid_15407519 No description available 0.02 Gene family
Solyc01g104840.3.1 Solyc01g104840.3 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
Solyc03g071560.3.1 Solyc03g071560.3 No description available 0.02 Gene family
Solyc10g081180.2.1 Solyc10g081180.2 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.02 Gene family
Zm00001d013568 GRMZM2G165901 27.4 RNA.RNA binding Encodes a small glycine-rich RNA... 0.05 Gene family
Zm00001d028661 GRMZM2G077797 No description available 0.03 Gene family
Zm00001d033511 GRMZM2G083783 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001878 Znf_CCHC 128 143
IPR000504 RRM_dom 10 78
No external refs found!