Zm00001e028672_P001 (Zm00001e028672)

Aliases : Zm00001e028672

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e028672_P001
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00264070	CDF3,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00030p00153440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AMTR_s00059p00213350	ADOF1, DOF1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00160p00054480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT4G21040	No alias	Dof-type zinc finger domain-containing protein	0.03	OrthoFinder output from all 47 species
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
Aev_g39679	CDF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g04849	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.03	OrthoFinder output from all 47 species
Cba_g11407	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g25585	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.09G055200.1	TMO6, Ceric.09G055200	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.11G014800.1	Ceric.11G014800	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.11G043000.1	TMO6, Ceric.11G043000	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.11G069300.1	TMO6, Ceric.11G069300	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.19G053600.1	ADOF1, DOF1,...	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.26G037300.1	TMO6, Ceric.26G037300	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.30G042800.1	OBP3, Ceric.30G042800	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G056200.1	Ceric.34G056200	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g11850	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g26721	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16327	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g30636	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
LOC_Os03g38870.1	LOC_Os03g38870	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os04g58190.1	LOC_Os04g58190	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g13260.1	OBP3, LOC_Os07g13260	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os08g38220.1	LOC_Os08g38220	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os10g35300.2	LOC_Os10g35300	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Mp2g20790.1	TMO6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Ore_g17212	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g41543	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g46456	CDF2	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g05155	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007584	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1335	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870	TMO6	transcription factor *(DOF) & original description: CDS=1-1464	0.02	OrthoFinder output from all 47 species
Sam_g18123	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18370	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g26799	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Smo89924	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc03g115940.4.1	CDF3, Solyc03g115940	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Spa_g09440	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006190_P001	Zm00001e006190	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e011750_P002	Zm00001e011750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	33	87

External Links

No external refs found!

Zm00001e028672_P001 (Zm00001e028672)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation