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  5. Zm00001e028613_P001

Zm00001e028613_P001 (Zm00001e028613)


Aliases : Zm00001e028613

Description : Putative clathrin assembly protein At1g03050 OS=Arabidopsis thaliana (sp|q9sa65|cap4_arath : 234.0)


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028613_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g055261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08995.t1 Aspi01Gene08995 accessory protein *(PlCALM3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40710.t1 Aspi01Gene40710 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58873.t1 Aspi01Gene58873 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g22099 No alias accessory protein *(PlCALM3) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g70257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G007000.1 Ceric.34G007000 not classified & original description: pacid=50623589... 0.02 OrthoFinder output from all 47 species
GSVIVT01015603001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
LOC_Os02g55970.1 LOC_Os02g55970 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os05g02140.1 LOC_Os05g02140 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
MA_10432705g0010 No alias Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Mp2g22330.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.04 OrthoFinder output from all 47 species
Nbi_g33181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16774 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g07860 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07861 No alias accessory protein *(PlCALM3) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g25747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023668_P001 Zm00001e023668 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Zm00001e029642_P001 Zm00001e029642 Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 38 173
No external refs found!