Zm00001e028587_P002 (AL4, Zm00001e028587)

Aliases : AL4, Zm00001e028587

Description : Alfin-like transcription factor

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e028587_P002
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
AT2G02470	AL6	alfin-like 6	0.03	OrthoFinder output from all 47 species
AT3G42790	AL3	alfin-like 3	0.04	OrthoFinder output from all 47 species
Adi_g105203	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Aev_g46576	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Aob_g04973	AL6	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Aop_g02047	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Cba_g03032	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Dde_g05713	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
LOC_Os01g66420.1	AL5, LOC_Os01g66420	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os11g14010.1	AL7, LOC_Os11g14010	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Len_g12567	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Pir_g12876	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Ppi_g45953	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Sam_g19302	No alias	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Solyc01g102760.3.1	AL6, Solyc01g102760	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Solyc07g041190.3.1	AL5, Solyc07g041190	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Solyc12g096040.3.1	AL4, Solyc12g096040	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Tin_g00544	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Zm00001e009371_P002	AL2, Zm00001e009371	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021998	Alfin_N	80	174
IPR021998	Alfin_N	15	50
IPR019787	Znf_PHD-finger	235	284

External Links

No external refs found!

Zm00001e028587_P002 (AL4, Zm00001e028587)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation