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Aliases : Zm00001e028504
Description : component SNAPC3/SRD2 of SNAP snRNA transcription factor complex
Gene families : OG0006377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006377_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e028504_P001 | |
| Cluster | HCCA: Cluster_173 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G65230 | No alias | Uncharacterized conserved protein (DUF2358) | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g019793 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g08171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09898 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12629 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Als_g21511 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g16546 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g22026 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g11027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.16G038200.1 | Ceric.16G038200 | not classified & original description: pacid=50589423... | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g12465 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g03299 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01019072001 | No alias | No description available | 0.11 | OrthoFinder output from all 47 species | |
| Gb_14335 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g68450.1 | LOC_Os01g68450 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Len_g32053 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g11471 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g07020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36784 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g18061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g32523 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g33549 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005854 | No alias | not classified & original description: CDS=871-1560 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18703 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g24663 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo83381 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g056580.3.1 | Solyc04g056580 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g56159 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| No external refs found! |