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  5. Zm00001e028443_P002

Zm00001e028443_P002 (Zm00001e028443)


Aliases : Zm00001e028443

Description : F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 221.0)


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028443_P002
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Adi_g007980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043090 No alias not classified & original description: CDS=327-2291 0.03 OrthoFinder output from all 47 species
Ceric.28G046200.1 Ceric.28G046200 not classified & original description: pacid=50570096... 0.03 OrthoFinder output from all 47 species
Ceric.29G067600.1 Ceric.29G067600 not classified & original description: pacid=50625342... 0.02 OrthoFinder output from all 47 species
Dac_g12546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g69270.1 LOC_Os01g69270 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g02833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013455 No alias not classified & original description: CDS=833-2278 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021897 No alias not classified & original description: CDS=923-2077 0.03 OrthoFinder output from all 47 species
Smo66287 No alias F-box protein At1g67340 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g38793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 381 421
No external refs found!