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  5. Zm00001e028312_P001

Zm00001e028312_P001 (Zm00001e028312)


Aliases : Zm00001e028312

Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana (sp|q947d2|praf1_arath : 840.0)


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028312_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G76950 PRAF1 Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
AT5G12350 No alias Regulator of chromosome condensation (RCC1) family with... 0.05 OrthoFinder output from all 47 species
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
Adi_g014208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72134.t1 Aspi01Gene72134 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0167.g054488 No alias not classified & original description: CDS=1991-5185 0.05 OrthoFinder output from all 47 species
Cba_g04091 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Ceric.25G075400.1 Ceric.25G075400 not classified & original description: pacid=50594355... 0.03 OrthoFinder output from all 47 species
Cre16.g691050 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Ehy_g30318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001675001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species
Gb_13554 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72320.1 LOC_Os01g72320 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g31920.2 LOC_Os05g31920 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Len_g14356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_54149g0010 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.07 OrthoFinder output from all 47 species
Mp1g24610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Nbi_g06824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006893 No alias not classified & original description: CDS=1775-4951 0.04 OrthoFinder output from all 47 species
Smo112120 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Solyc04g071040.4.1 PRAF1, Solyc04g071040 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Solyc11g065120.3.1 Solyc11g065120 PH, RCC1 and FYVE domains-containing protein 1... 0.09 OrthoFinder output from all 47 species
Tin_g11713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028276_P001 Zm00001e028276 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 1019 1073
IPR027988 BRX_N 912 946
IPR000306 Znf_FYVE 656 722
IPR000408 Reg_chr_condens 329 377
IPR000408 Reg_chr_condens 551 600
IPR000408 Reg_chr_condens 605 652
IPR000408 Reg_chr_condens 499 548
IPR000408 Reg_chr_condens 436 484
IPR000408 Reg_chr_condens 380 432
No external refs found!