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  5. Zm00001e028004_P001

Zm00001e028004_P001 (Zm00001e028004)


Aliases : Zm00001e028004

Description : no hits & (original description: none)


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028004_P001
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Adi_g008163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g120900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70668.t1 Aspi01Gene70668 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007708 No alias not classified & original description: CDS=120-2903 0.05 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.04 OrthoFinder output from all 47 species
Dcu_g15160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_113167g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g13051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.03 OrthoFinder output from all 47 species
Sam_g14569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc05g018750.4.1 Solyc05g018750 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g46247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 20 78
No external refs found!