Zm00001e027849_P001 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Zm00001e027849

Description : subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027849_P001

Target	Alias	Description	ECC score	Gene Family Method
Ala_g16443	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g22771	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g22353	ABCG40, PDR12,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g70240	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene28061.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene72851.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene72851.t2	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0388.g067636	ATPDR3, PDR3	subfamily ABCG transporter & original description: CDS=125-3580	0.02	OrthoFinder output from all 47 species
Ceric.12G068500.1	ABCG40, PDR12,...	subfamily ABCG transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.30G029300.1	ABCG40, PDR12,...	subfamily ABCG transporter & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.38G052500.1	PEN3, ABCG36,...	subfamily ABCG transporter & original description:...	0.01	OrthoFinder output from all 47 species
Dac_g22063	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01031314001	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_34645	PDR4, ATPDR4	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g11760.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
LOC_Os02g21340.1	PDR11, ATPDR11,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Nbi_g34365	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g27134	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g33371	ATPDR7, PDR7	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g40984	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo429390	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Solyc11g007290.1.1	PDR11, ATPDR11,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Spa_g24438	PDR11, ATPDR11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g30715	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12264	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.09	OrthoFinder output from all 47 species
Zm00001e033689_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	875	1027
IPR013581	PDR_assoc	728	792
IPR013525	ABC_2_trans	1172	1386
IPR013525	ABC_2_trans	511	722
IPR029481	ABC_trans_N	100	149
IPR003439	ABC_transporter-like_ATP-bd	175	357

External Links

No external refs found!

Zm00001e027849_P001 (ABCG40, PDR12,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation