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Aliases : CRR21, Zm00001e027846
Description : RNA editing factor (CRR21)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e027846_P001 | |
| Cluster | HCCA: Cluster_124 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00153950 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00259690 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46460,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00204910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g19191,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00127300 | MEF22,... | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G13650 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18750 | DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012988 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g095424 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101343 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g104656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18491 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Als_g18980 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19294 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55325 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g61269 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g69406 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45825.t1 | Aspi01Gene45825 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15334 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19308 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19909 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67804 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g68945 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43122 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02932 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03935 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03977 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05848 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09537 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12890 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g15911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g18997 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g21837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21844 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22169 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22659 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25585 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28521 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g28812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50518 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009407001 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009974001 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011333001 | SLO1 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015466001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023345001 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01023971001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024588001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00195 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_03578 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_05554 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05647 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06572 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_08569 | OTP84 | RNA editing factor (OTP82) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_11220 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11688 | CRR2 | OTP70 plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
| Gb_11926 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13222 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_14172 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_14324 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14966 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16327 | CRR22 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16448 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17076 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_18745 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20634 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23678 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27176 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27322 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_29995 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_31374 | EMB2261 | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33051 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33210 | OTP84 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35190 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_37517 | CRR22 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38680 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39402 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g45840.1 | LOC_Os01g45840 | Pentatricopeptide repeat-containing protein At2g36730... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g50280.1 | CRR22, LOC_Os02g50280 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g12130.1 | EMB2261, LOC_Os05g12130 | RNA editing factor (ECD1) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g49920.1 | VAC1, ECB2,... | RNA editing factor (ECB2/VAC1) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g50950.1 | LOC_Os05g50950 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g02280.1 | LOC_Os07g02280 | RNA editing factor (OTP80) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g13074 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18963 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g24823 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g25515 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431227g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_11074g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_123466g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_138676g0010 | EMB2261 | RNA editing factor (ECD1) | 0.02 | OrthoFinder output from all 47 species | |
| MA_16823g0010 | CRR22 | RNA editing factor (MEF19) | 0.04 | OrthoFinder output from all 47 species | |
| MA_17949g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_18165g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| MA_20622g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_2991g0010 | No alias | RNA editing factor (MEF12) | 0.02 | OrthoFinder output from all 47 species | |
| MA_30949g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_322292g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.08 | OrthoFinder output from all 47 species | |
| MA_34492g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_381817g0020 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| MA_64083g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_681272g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8678g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_9415113g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_9526611g0020 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14332 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41118 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g10472 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g32642 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07300 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g13676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01848 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03395 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11351 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12989 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13586 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g20473 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g38691 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g57716 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g60411 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g04648 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05267 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07605 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09801 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16300 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g35971 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g35991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53559 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53944 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g56308 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61794 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo124564 | CRR22 | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | OrthoFinder output from all 47 species | |
| Smo432405 | No alias | No description available | 0.08 | OrthoFinder output from all 47 species | |
| Solyc01g095160.3.1 | Solyc01g095160 | Pentatricopeptide repeat-containing protein At4g37170... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g098150.3.1 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g048900.1.1 | Solyc06g048900 | Pentatricopeptide repeat-containing protein At2g40720... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14289 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g17519 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g27591 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30057 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g52496 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53361 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53489 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53894 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56367 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57149 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016542_P001 | Zm00001e016542 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e021457_P001 | CRR22, Zm00001e021457 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023498_P001 | VAC1, ECB2,... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040418_P001 | Zm00001e040418 | Pentatricopeptide repeat-containing protein At3g05340... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| No external refs found! |