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  5. Zm00001e027738_P003

Zm00001e027738_P003 (Zm00001e027738)


Aliases : Zm00001e027738

Description : no hits & (original description: none)


Gene families : OG0003008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027738_P003
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00041870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G29400 No alias Protein of unknown function (DUF3531) 0.03 OrthoFinder output from all 47 species
AT5G08400 No alias Protein of unknown function (DUF3531) 0.05 OrthoFinder output from all 47 species
Adi_g042340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G067200.1 Ceric.14G067200 not classified & original description: pacid=50634031... 0.03 OrthoFinder output from all 47 species
GSVIVT01034332001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_14630 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g37820.1 LOC_Os01g37820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g58120.1 LOC_Os02g58120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g00384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g00449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g081080.3.1 Solyc08g081080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g045310.2.1 Solyc10g045310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021920 DUF3531 138 279
No external refs found!