Zm00001e027604_P001 (Zm00001e027604)

Aliases : Zm00001e027604

Description : subfamily ABCG transporter

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027604_P001
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Cba_g06245	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g07276	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g10068	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g25490	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g30393	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os05g31910.2	LOC_Os05g31910	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Len_g48614	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g26422	No alias	subfamily ABCG transporter & original description: none	0.09	OrthoFinder output from all 47 species
Ore_g34030	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c9_18880V3.1	Pp3c9_18880	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
Solyc09g005970.1.1	Solyc09g005970	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Tin_g11561	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g44760	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	407	616
IPR003439	ABC_transporter-like_ATP-bd	89	242

External Links

No external refs found!

Zm00001e027604_P001 (Zm00001e027604)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation