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  5. LOC_Os03g60540

LOC_Os03g60540


Description : 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family C2H2-type zinc finger family protein


Gene families : OG_01_0000035 (Gene family) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g60540
Cluster HCCA cluster: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.03 Gene family
AT3G60580 No alias C2H2-like zinc finger protein 0.02 Gene family
AT5G67450 AZF1, ZF1 zinc-finger protein 1 0.03 Gene family
GSVIVT01037851001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
LOC_Os03g32230 Os03g0437200 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
LOC_Os03g41390 Os03g0610400 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
LOC_Os03g55540 Os03g0764100 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
LOC_Os03g60560 Os03g0820300 No description available 0.02 Gene family
LOC_Os03g60570 Os03g0820400 No description available 0.02 Gene family
LOC_Os04g46680 Os04g0552700 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
LOC_Os10g40660 Os10g0555300 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
LOC_Os11g47630 Os11g0702400 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
LOC_Os12g39400 Os12g0583700 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
MA_10426425g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
MA_30401g0010 No alias No description available 0.01 Gene family
MA_70076g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
MA_858691g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
MA_93487g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc04g077980.1.1 Solyc04g077980.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Solyc06g005180.1.1 Solyc06g005180.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc06g060740.2.1 Solyc06g060740.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
Solyc09g008440.1.1 Solyc09g008440.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc12g088390.2.1 Solyc12g088390.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d012430 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d012968 GRMZM2G002805 No description available 0.04 Gene family
Zm00001d013208 GRMZM2G035103 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Zm00001d022002 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.06 Gene family
Zm00001d029553 GRMZM2G464580 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Zm00001d029584 GRMZM5G883760 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Zm00001d029586 GRMZM2G106026 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Zm00001d029587 GRMZM2G069176 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Zm00001d029589 GRMZM2G356556 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d034145 GRMZM2G400714 No description available 0.03 Gene family
Zm00001d034641 GRMZM2G061626 No description available 0.03 Gene family
Zm00001d034642 GRMZM2G361210 No description available 0.02 Gene family
Zm00001d047102 GRMZM2G152214 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
Zm00001d047298 GRMZM2G372952 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Zm00001d047330 GRMZM2G105092 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Zm00001d047334 GRMZM2G113860 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Zm00001d051370 GRMZM2G315079 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!