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  5. Zm00001e027415_P001

Zm00001e027415_P001 (LBD41, Zm00001e027415)


Aliases : LBD41, Zm00001e027415

Description : transcription factor (AS2/LOB)


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027415_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00088960 LBD41,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
AT1G67100 LBD40 LOB domain-containing protein 40 0.07 OrthoFinder output from all 47 species
AT3G02550 LBD41 LOB domain-containing protein 41 0.1 OrthoFinder output from all 47 species
AT5G67420 LBD37, ASL39 LOB domain-containing protein 37 0.03 OrthoFinder output from all 47 species
Aspi01Gene38372.t1 LBD38, Aspi01Gene38372 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13473 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G068800.1 LBD37, ASL39,... AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G070700.1 LBD38, Ceric.08G070700 AS2/LOB-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dde_g20897 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008284001 LBD40 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 OrthoFinder output from all 47 species
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.1 OrthoFinder output from all 47 species
Gb_36943 LBD40 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g20800.1 LOC_Os01g20800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g32770.1 LBD41, LOC_Os01g32770 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
LOC_Os03g33090.1 LOC_Os03g33090 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc03g119530.3.1 LBD41, Solyc03g119530 transcription factor (AS2/LOB) 0.1 OrthoFinder output from all 47 species
Zm00001e005129_P001 LBD37, ASL39,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 21 119
No external refs found!