1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e027401_P002

Zm00001e027401_P002 (TCP5, Zm00001e027401)


Aliases : TCP5, Zm00001e027401

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027401_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
Adi_g000708 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30415 TCP2 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02916.t1 ATTCP24, TCP24,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007839 TCP5 TCP-type transcription factor & original description: CDS=1-1389 0.01 OrthoFinder output from all 47 species
Azfi_s0168.g054602 TCP3 TCP-type transcription factor & original description: CDS=18-1559 0.01 OrthoFinder output from all 47 species
Cba_g22010 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07031 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07892 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g43760.1 TCP5, LOC_Os05g43760 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g05720.1 TCP2, LOC_Os07g05720 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Ore_g27318 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g10357 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g008780.1.1 TCP10, Solyc10g008780 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e005909_P001 TCP2, Zm00001e005909 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e011516_P001 TCP2, Zm00001e011516 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e011911_P001 ATTCP24, TCP24,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e032821_P001 TCP2, Zm00001e032821 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 57 118
No external refs found!