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  5. Zm00001e027278_P002

Zm00001e027278_P002 (Zm00001e027278)


Aliases : Zm00001e027278

Description : pyruvate decarboxylase


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027278_P002
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT4G33070 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.12 OrthoFinder output from all 47 species
Ala_g11584 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G029800.1 Ceric.39G029800 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g03799 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10131 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003940001 PDC2 Carbohydrate metabolism.fermentation.alcoholic... 0.17 OrthoFinder output from all 47 species
GSVIVT01021184001 PDC2 Carbohydrate metabolism.fermentation.alcoholic... 0.09 OrthoFinder output from all 47 species
Gb_12301 PDC2 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
Gb_33733 PDC2 pyruvate decarboxylase 0.06 OrthoFinder output from all 47 species
Gb_33735 PDC2 pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species
LOC_Os03g18220.1 LOC_Os03g18220 pyruvate decarboxylase 0.14 OrthoFinder output from all 47 species
LOC_Os05g39310.1 LOC_Os05g39310 pyruvate decarboxylase 0.13 OrthoFinder output from all 47 species
LOC_Os05g39320.1 LOC_Os05g39320 pyruvate decarboxylase 0.13 OrthoFinder output from all 47 species
Solyc09g005110.3.1 PDC2, Solyc09g005110 pyruvate decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc10g076510.2.1 Solyc10g076510 pyruvate decarboxylase 0.16 OrthoFinder output from all 47 species
Zm00001e025833_P001 PDC2, Zm00001e025833 pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 291 403
IPR011766 TPP_enzyme_TPP-bd 501 626
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 94 260
No external refs found!