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  5. Zm00001e027244_P001

Zm00001e027244_P001 (ATUBC7, UBC7, Zm00001e027244)


Aliases : ATUBC7, UBC7, Zm00001e027244

Description : component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2 ubiquitin-conjugating component Ubc7/13/14 of HRD1 E3 ubiquitin ligase complex


Gene families : OG0001574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027244_P001
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00159180 ATUBC7, UBC7,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g073644 ATUBC7, UBC7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03063 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Cba_g45853 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Cre12.g546650 ATUBC7, UBC7 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g07186 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Dde_g03186 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Dde_g09311 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
GSVIVT01034196001 UBC13 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g02541 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Spa_g51195 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 12 148
No external refs found!