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  5. Zm00001e027175_P002

Zm00001e027175_P002 (GH9C2, AtGH9C2, Zm00001e027175)


Aliases : GH9C2, AtGH9C2, Zm00001e027175

Description : Endoglucanase 15 OS=Oryza sativa subsp. japonica (sp|q6l4i2|gun15_orysj : 930.0)


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027175_P002

Target Alias Description ECC score Gene Family Method Actions
AT1G19940 AtGH9B5, GH9B5 glycosyl hydrolase 9B5 0.06 OrthoFinder output from all 47 species
AT1G48930 AtGH9C1, GH9C1 glycosyl hydrolase 9C1 0.02 OrthoFinder output from all 47 species
AT1G70710 CEL1, GH9B1, ATGH9B1 glycosyl hydrolase 9B1 0.03 OrthoFinder output from all 47 species
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.02 OrthoFinder output from all 47 species
AT4G02290 AtGH9B13, GH9B13 glycosyl hydrolase 9B13 0.03 OrthoFinder output from all 47 species
Aev_g34408 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G049400.1 GH9C2, AtGH9C2,... class-C endo-1,4-beta-glucanase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15980 AtGH9B5, GH9B5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019664001 ATCEL2, CEL2 Endoglucanase 1 OS=Persea americana 0.04 OrthoFinder output from all 47 species
Gb_15573 AtGH9B13, GH9B13 endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species
Gb_28546 GH9C2, AtGH9C2 Endoglucanase 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_29204 AtGH9B6, GH9B6 Endoglucanase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_29209 ATCEL2, CEL2 Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Gb_32668 ATCEL2, CEL2 Endoglucanase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g02220.1 ATCEL2, CEL2,... Endoglucanase 19 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36060.1 GH9B18,... Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_10430521g0010 AtGH9A4, GH9A4 Endoglucanase 16 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_195523g0010 AtGH9A4, GH9A4 Endoglucanase 16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g17860.1 ATCEL2, CEL2 Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Nbi_g39768 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17329 AtGH9A4, GH9A4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42836 AtGH9B5, GH9B5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019803 AtGH9A4, GH9A4 not classified & original description: CDS=1-363 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027084 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g25927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g055980.1.1 GH9C2, AtGH9C2,... Endoglucanase 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e013509_P001 ATCEL2, CEL2,... Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e026190_P002 AtGH9B13,... Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e029192_P001 ATCEL2, CEL2,... Endoglucanase 19 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Zm00001e030964_P003 CEL1, GH9B1,... Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019028 CBM_49 531 608
IPR001701 Glyco_hydro_9 29 492
No external refs found!