LOC_Os03g60100 (Os03g0815400)


Aliases : Os03g0815400

Description : 29.2.1.1.1.2.17 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17 Ribosomal protein L17 family protein


Gene families : OG_01_0002260 (Gene family) Phylogenetic Tree(s): OG0002260_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g60100
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G54210 No alias Ribosomal protein L17 family protein 0.13 Gene family
Cpa|evm.model.tig00000889.52 No alias 29.2.1.1.1.2.17 protein.synthesis.ribosomal... 0.04 Gene family
Cre02.g108850 No alias 29.2.1.1.1.2.17 protein.synthesis.ribosomal... 0.11 Gene family
GSVIVT01026526001 No alias 29.2.1.1.3.2.17 protein.synthesis.ribosomal... 0.02 Gene family
GSVIVT01037929001 No alias 29.2.1.1.1.2.17 protein.synthesis.ribosomal... 0.04 Gene family
LOC_Os05g38580 Os05g0460700 29.2.1.1.3.2.17 protein.synthesis.ribosomal... 0.02 Gene family
Solyc06g082750.3.1 Solyc06g082750.3 29.2.1.1.1.2.17 protein.synthesis.ribosomal... 0.12 Gene family
Solyc06g082760.3.1 Solyc06g082760.3 29.2.1.1.1.2.17 protein.synthesis.ribosomal... 0.13 Gene family
Zm00001d012998 GRMZM2G108643 29.2.1.1.1.2.17 protein.synthesis.ribosomal... 0.17 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 114 210
No external refs found!