Zm00001e027097_P001 (Zm00001e027097)

Aliases : Zm00001e027097

Description : transcription factor (mTERF)

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027097_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00117910	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00225250	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00225430	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00230750	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00235420	EMB93, SOLDAT10,...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00236050	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00236280	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00236880	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00038p00175390	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s01360p00009540	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s02857p00005060	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AT1G62110	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
AT3G46950	No alias	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
AT5G23930	No alias	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
Als_g05025	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g28440	EMB2219	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12051	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g28360	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g12846	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g14738	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.20G017100.1	Ceric.20G017100	mTERF-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g10992	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022213001	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
Gb_07257	PTAC15	TAC15 cofactor of plastid-encoded RNA polymerase....	0.04	OrthoFinder output from all 47 species
Gb_15878	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Gb_26213	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g33440.1	LOC_Os05g33440	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g33460.2	LOC_Os05g33460	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
LOC_Os06g12060.1	LOC_Os06g12060	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g12110.1	LOC_Os06g12110	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
LOC_Os07g24090.1	LOC_Os07g24090	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
LOC_Os11g09990.1	LOC_Os11g09990	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Len_g21383	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g10120	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10041174g0010	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
MA_192398g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_3151g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_493420g0010	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Ore_g26508	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32507	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18975	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo419725	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
Solyc04g051880.3.1	Solyc04g051880	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072500.1.1	Solyc04g072500	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Solyc04g072520.3.1	Solyc04g072520	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Tin_g12946	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	143	338
IPR003690	MTERF	78	224

External Links

No external refs found!

Zm00001e027097_P001 (Zm00001e027097)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation