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  5. Zm00001e027059_P003

Zm00001e027059_P003 (Zm00001e027059)


Aliases : Zm00001e027059

Description : component MED26 of MEDIATOR transcription co-activator complex


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027059_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00061970 evm_27.TU.AmTr_v1... Probable mediator of RNA polymerase II transcription... 0.05 OrthoFinder output from all 47 species
AT5G05140 No alias Transcription elongation factor (TFIIS) family protein 0.05 OrthoFinder output from all 47 species
Adi_g014134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076735 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g107705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01712 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ala_g09671 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21085 No alias component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Als_g14915 No alias component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Aop_g03202 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Aop_g26262 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30064.t1 Aspi01Gene30064 component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Cba_g69237 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ceric.15G055300.1 Ceric.15G055300 component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ceric.22G058100.1 Ceric.22G058100 component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Ceric.30G069800.1 Ceric.30G069800 not classified & original description: pacid=50608596... 0.02 OrthoFinder output from all 47 species
Ceric.31G055300.1 Ceric.31G055300 not classified & original description: pacid=50574382... 0.05 OrthoFinder output from all 47 species
Dac_g16415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18808 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
GSVIVT01025776001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.06 OrthoFinder output from all 47 species
LOC_Os01g17990.1 LOC_Os01g17990 component MED26 of MEDIATOR transcription co-activator complex 0.04 OrthoFinder output from all 47 species
LOC_Os03g24950.1 LOC_Os03g24950 component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g34210.1 LOC_Os05g34210 component MED26 of MEDIATOR transcription co-activator complex 0.08 OrthoFinder output from all 47 species
Len_g01212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31661 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g01694 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Msp_g02067 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Nbi_g07252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20016 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Pnu_g08667 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Pnu_g08668 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Pnu_g24692 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ppi_g17469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005713 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011548 No alias not classified & original description: CDS=1-762 0.02 OrthoFinder output from all 47 species
Sam_g29122 No alias component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Sam_g29561 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Smo404483 No alias Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species
Solyc10g080930.2.1 Solyc10g080930 component MED26 of MEDIATOR transcription co-activator complex 0.07 OrthoFinder output from all 47 species
Solyc11g005450.3.1 Solyc11g005450 Probable mediator of RNA polymerase II transcription... 0.06 OrthoFinder output from all 47 species
Spa_g04232 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 208 254
No external refs found!