- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e026690
Description : Pathogenesis-related protein 1B OS=Nicotiana tabacum (sp|p07053|pr1b_tobac : 107.0)
Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00244110 | evm_27.TU.AmTr_v1... | Pathogenesis-related protein PR-1 OS=Medicago truncatula | 0.1 | OrthoFinder output from all 47 species | |
| AT1G01310 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.09 | OrthoFinder output from all 47 species | |
| AT1G50060 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G19980 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G09590 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G25780 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.07 | OrthoFinder output from all 47 species | |
| AT4G30320 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G02730 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G57625 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71537.t1 | Aspi01Gene71537 | CAPE precursor polypeptide & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05029 | No alias | CAPE precursor polypeptide & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06229 | No alias | CAPE precursor polypeptide & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G062700.1 | Ceric.18G062700 | CAPE precursor polypeptide & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G062900.1 | Ceric.18G062900 | CAPE precursor polypeptide & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G063000.1 | Ceric.18G063000 | CAPE precursor polypeptide & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G049200.1 | Ceric.33G049200 | CAPE precursor polypeptide & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g011630 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g278160 | No alias | Pathogenesis-related protein 1A1 OS=Solanum lycopersicum | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g33701 | No alias | CAPE precursor polypeptide & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08251 | No alias | CAPE precursor polypeptide & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19657 | No alias | CAPE precursor polypeptide & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025577001 | No alias | Pathogenesis-related protein 1C OS=Nicotiana tabacum | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01036993001 | No alias | Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g51660.1 | LOC_Os05g51660 | Pathogenesis-related protein 1B OS=Nicotiana tabacum... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g43700.1 | LOC_Os12g43700 | Pathogenesis-related protein PR-1 OS=Medicago truncatula... | 0.1 | OrthoFinder output from all 47 species | |
| MA_175771g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_178424g0010 | No alias | Pathogenesis-related protein PR-1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
| MA_2097164g0010 | No alias | Pathogenesis-related protein PR-1 OS=Medicago truncatula... | 0.03 | OrthoFinder output from all 47 species | |
| MA_77819g0010 | No alias | Pathogenesis-related protein PR-1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g14110.1 | ATPR1, PR1, PR 1 | Pathogenesis-related protein 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g14130.1 | ATPR1, PR1, PR 1 | Pathogenesis-related protein 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g21890.1 | No alias | Pathogenesis-related protein 1C OS=Nicotiana tabacum... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05598 | No alias | CAPE precursor polypeptide & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g36218 | No alias | CAPE precursor polypeptide & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006515 | No alias | CAPE precursor polypeptide & original description: CDS=1-528 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g106600.2.1 | Solyc01g106600 | Basic form of pathogenesis-related protein 1... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g068990.2.1 | Solyc08g068990 | Pathogenesis-related protein 1C OS=Nicotiana tabacum... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g005950.3.1 | Solyc09g005950 | Pathogenesis-related protein PRMS OS=Zea mays... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g40250 | No alias | CAPE precursor polypeptide & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002028_P001 | ATPR1, PR1, PR... | Pathogenesis-related protein PRMS OS=Zea mays... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0030570 | pectate lyase activity | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014044 | CAP_domain | 107 | 229 |
| No external refs found! |