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  5. Zm00001e026570_P001

Zm00001e026570_P001 (WTF1, AtWTF1, Zm00001e026570)


Aliases : WTF1, AtWTF1, Zm00001e026570

Description : WTF1 plastidial RNA basal splicing factor


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026570_P001
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT4G01037 WTF1, AtWTF1 Ubiquitin carboxyl-terminal hydrolase family protein 0.07 OrthoFinder output from all 47 species
AT4G08940 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
AT5G62990 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein 0.05 OrthoFinder output from all 47 species
Adi_g085887 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Aev_g10201 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12370 WTF1, AtWTF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29986 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21348.t1 WTF1, AtWTF1,... plastidial RNA basal splicing factor *(WTF1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0055.g033936 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.05 OrthoFinder output from all 47 species
Cba_g17771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22101 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.24G041500.1 WTF1, AtWTF1,... plastidial RNA basal splicing factor *(WTF1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01485 WTF1, AtWTF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25601 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027077001 WTF1, AtWTF1 RNA processing.organelle machineries.RNA... 0.12 OrthoFinder output from all 47 species
Gb_07993 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g49610.1 WTF1, AtWTF1,... WTF1 plastidial RNA basal splicing factor 0.07 OrthoFinder output from all 47 species
Len_g11779 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05402 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
MA_158434g0010 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
MA_175611g0010 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_423098g0010 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.07 OrthoFinder output from all 47 species
Mp3g04080.1 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.04 OrthoFinder output from all 47 species
Msp_g11347 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04260 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06540 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09523 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004928 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012917 WTF1, AtWTF1 not classified & original description: CDS=1-1233 0.04 OrthoFinder output from all 47 species
Smo409264 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Tin_g20353 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 59 387
No external refs found!