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  5. Zm00001e026403_P001

Zm00001e026403_P001 (Zm00001e026403)


Aliases : Zm00001e026403

Description : Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana (sp|q9fn15|gld27_arath : 131.0)


Gene families : OG0002972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026403_P001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT5G11840 No alias Protein of unknown function (DUF1230) 0.08 OrthoFinder output from all 47 species
Adi_g017916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11422 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012142 No alias not classified & original description: CDS=1-936 0.03 OrthoFinder output from all 47 species
Ceric.02G088200.1 Ceric.02G088200 not classified & original description: pacid=50585579... 0.06 OrthoFinder output from all 47 species
Dcu_g03637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39571 No alias Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,... 0.04 OrthoFinder output from all 47 species
LOC_Os05g46250.1 LOC_Os05g46250 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27,... 0.03 OrthoFinder output from all 47 species
Msp_g27463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54314 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR009631 CGLD27-like 59 203
No external refs found!