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  5. Zm00001e026116_P001

Zm00001e026116_P001 (Zm00001e026116)


Aliases : Zm00001e026116

Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 196.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026116_P001
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00256130 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00156p00066850 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g16121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000579001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Ore_g23837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 349 384
IPR001680 WD40_repeat 401 444
IPR001680 WD40_repeat 244 281
No external refs found!