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  5. Zm00001e025833_P001

Zm00001e025833_P001 (PDC2, Zm00001e025833)


Aliases : PDC2, Zm00001e025833

Description : pyruvate decarboxylase


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025833_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G33070 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.04 OrthoFinder output from all 47 species
AT5G01330 PDC3 pyruvate decarboxylase-3 0.03 OrthoFinder output from all 47 species
Dcu_g41262 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50750 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08494 No alias Pyruvate decarboxylase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_12301 PDC2 pyruvate decarboxylase 0.03 OrthoFinder output from all 47 species
Gb_33735 PDC2 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
Gb_36228 No alias Pyruvate decarboxylase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g18220.1 LOC_Os03g18220 pyruvate decarboxylase 0.06 OrthoFinder output from all 47 species
LOC_Os05g39310.1 LOC_Os05g39310 pyruvate decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os05g39320.1 LOC_Os05g39320 pyruvate decarboxylase 0.04 OrthoFinder output from all 47 species
Ppi_g16757 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g076510.2.1 Solyc10g076510 pyruvate decarboxylase 0.06 OrthoFinder output from all 47 species
Zm00001e001325_P003 Zm00001e001325 pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species
Zm00001e027278_P002 Zm00001e027278 pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 29 200
IPR011766 TPP_enzyme_TPP-bd 439 564
IPR012000 Thiamin_PyroP_enz_cen_dom 229 338
No external refs found!