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  5. Zm00001e025697_P001

Zm00001e025697_P001 (Zm00001e025697)


Aliases : Zm00001e025697

Description : RING-v-class E3 ligase


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025697_P001
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Ala_g14258 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68684 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17220 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os09g24650.2 LOC_Os09g24650 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g21354 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31396 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g091230.4.1 Solyc02g091230 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 56 101
IPR022143 DUF3675 107 222
No external refs found!