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  5. Zm00001e024878_P003

Zm00001e024878_P003 (UBP15, Zm00001e024878)


Aliases : UBP15, Zm00001e024878

Description : deubiquitinase (UBP15-21)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024878_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00170210 UBP15,... Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
AT1G17110 UBP15 ubiquitin-specific protease 15 0.05 OrthoFinder output from all 47 species
AT4G17895 UBP20 ubiquitin-specific protease 20 0.03 OrthoFinder output from all 47 species
AT4G24560 UBP16 ubiquitin-specific protease 16 0.06 OrthoFinder output from all 47 species
Adi_g004567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013898 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023978 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060737 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069165 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098237 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114935 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21642 UBP19 regulatory deubiquitinase *(UBP15) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19936 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15601 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04917 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26829.t1 UBP23, Aspi01Gene26829 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49835.t2 UBP18, Aspi01Gene49835 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011482 UBP23 not classified & original description: CDS=78-2153 0.03 OrthoFinder output from all 47 species
Cba_g14993 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G015900.1 UBP25, Ceric.22G015900 not classified & original description: pacid=50613832... 0.04 OrthoFinder output from all 47 species
Ceric.35G006100.1 UBP23, Ceric.35G006100 not classified & original description: pacid=50581315... 0.02 OrthoFinder output from all 47 species
Dac_g22138 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23037 UBP23 deubiquitinase *(UBP23) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08851 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26924 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31799 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000696001 UBP15 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
GSVIVT01001911001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01014079001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01033166001 UBP18 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
GSVIVT01038082001 UBP25 Protein degradation.peptidase families.cysteine-type... 0.07 OrthoFinder output from all 47 species
Gb_17492 UBP15 Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28125 UBP25 deubiquitinase (UBP25) 0.05 OrthoFinder output from all 47 species
Gb_30872 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Gb_38396 UBP18 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
LOC_Os02g14730.1 UBP15, LOC_Os02g14730 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
LOC_Os02g55180.1 UBP23, LOC_Os02g55180 deubiquitinase (UBP23) 0.01 OrthoFinder output from all 47 species
LOC_Os05g43480.1 UBP25, LOC_Os05g43480 deubiquitinase (UBP25) 0.05 OrthoFinder output from all 47 species
LOC_Os08g37350.1 UBP17, LOC_Os08g37350 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
LOC_Os09g28940.1 UBP17, LOC_Os09g28940 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Len_g45877 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03280 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11163 UBP25 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
MA_132593g0020 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_53569g0010 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
Nbi_g03824 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27850 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01994 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05280 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15722 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20105 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08769 UBP25 deubiquitinase *(UBP25) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo420048 UBP18 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Solyc04g076210.3.1 UBP16, Solyc04g076210 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Solyc07g061780.4.1 UBP15, Solyc07g061780 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
Spa_g24176 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05216 UBP25 deubiquiTinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12281 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003832_P001 UBP17, Zm00001e003832 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Zm00001e015501_P001 UBP21, Zm00001e015501 Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 438 740
IPR002893 Znf_MYND 88 125
No external refs found!