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  5. Zm00001e024817_P001

Zm00001e024817_P001 (Zm00001e024817)


Aliases : Zm00001e024817

Description : no hits & (original description: none)


Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024817_P001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT2G46380 No alias Protein of unknown function (DUF3133) 0.04 OrthoFinder output from all 47 species
AT3G61670 No alias Protein of unknown function (DUF3133) 0.03 OrthoFinder output from all 47 species
Als_g13885 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33858.t1 Aspi01Gene33858 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0061.g034992 No alias not classified & original description: CDS=1177-2823 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043154 No alias not classified & original description: CDS=30-3857 0.05 OrthoFinder output from all 47 species
Cba_g76968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G066700.1 Ceric.27G066700 not classified & original description: pacid=50605912... 0.03 OrthoFinder output from all 47 species
Dac_g16946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019501001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os02g15820.1 LOC_Os02g15820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g33320.1 LOC_Os06g33320 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g08412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18158 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g082040.4.1 Solyc08g082040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g49023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR021480 Zinc_ribbon_12 424 464
No external refs found!