Zm00001e024393_P001 (Zm00001e024393)

Aliases : Zm00001e024393

Description : transcription factor (SBP)

Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e024393_P001

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0308.g064040	SPL1	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g14742	SPL12	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06195	SPL1	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013452001	SPL1R2, ATSPL14,...	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
MA_10427464g0010	No alias	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
MA_16835g0010	SPL1	Squamosa promoter-binding-like protein 1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Pir_g60800	No alias	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g51231	No alias	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	170	243

External Links

No external refs found!