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  5. Zm00001e024278_P001

Zm00001e024278_P001 (VAMP714, ATVAMP714,...)


Aliases : VAMP714, ATVAMP714, Zm00001e024278

Description : VAMP7-type R-type SNARE longin protein


Gene families : OG0002036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024278_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g054787 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Als_g36746 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g41842 ATVAMP712, VAMP712 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Aop_g28673 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Cba_g24448 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Dcu_g01069 ATVAMP712, VAMP712 R-type VAMP7-group component of SNARE longin membrane... 0.05 OrthoFinder output from all 47 species
LOC_Os10g06540.1 VAMP714,... VAMP7-type R-type SNARE longin protein 0.04 OrthoFinder output from all 47 species
Ore_g10413 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Sam_g08656 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Smo80138 ATVAMP711, VAMP711 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR001388 Synaptobrevin-like 126 213
IPR010908 Longin_dom 29 110
No external refs found!