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  5. Zm00001e024273_P001

Zm00001e024273_P001 (Zm00001e024273)


Aliases : Zm00001e024273

Description : Choline transporter protein 1 OS=Arabidopsis thaliana (sp|q94an2|cher1_arath : 967.0)


Gene families : OG0003269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024273_P001
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264940 evm_27.TU.AmTr_v1... Choline transporter protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001239.11 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.16 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g09916 No alias choline transporter *(CHER/CTL1) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_03567 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_03568 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_10052 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os04g58470.1 LOC_Os04g58470 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os04g58504.1 LOC_Os04g58504 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_10429022g0020 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_89558g0010 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g063230.3.1 Solyc07g063230 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 339 681
No external refs found!