Zm00001e024232_P001 (Zm00001e024232)


Aliases : Zm00001e024232

Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 97.4)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024232_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171000 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G44930 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G44695 No alias No description available 0.02 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
Aev_g07692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08490.t1 Aspi01Gene08490 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22023.t1 Aspi01Gene22023 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22908.t1 Aspi01Gene22908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48413.t1 Aspi01Gene48413 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48414.t1 Aspi01Gene48414 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61845.t1 Aspi01Gene61845 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70527.t1 Aspi01Gene70527 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.06G018800.1 Ceric.06G018800 not classified & original description: pacid=50620702... 0.02 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g42111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g52521 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033794001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03494 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_11125 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_20041 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_23451 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_34674 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_37287 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g15230.1 LOC_Os05g15230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os06g08120.1 LOC_Os06g08120 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os11g33970.1 LOC_Os11g33970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g11757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435738g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10436979g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_109716g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_120599g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_120951g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9718623g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g34400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012180 No alias not classified & original description: CDS=1-1593 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012986 No alias not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0166.g024154 No alias not classified & original description: CDS=1-2307 0.02 OrthoFinder output from all 47 species
Solyc01g057260.4.1 Solyc01g057260 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g117260.2.1 Solyc03g117260 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g008900.4.1 Solyc04g008900 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc06g068340.3.1 Solyc06g068340 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 126 523
No external refs found!