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  5. Zm00001e023569_P001

Zm00001e023569_P001 (Zm00001e023569)


Aliases : Zm00001e023569

Description : putative silicon efflux transporter (LSI2)


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023569_P001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00226220 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.06 OrthoFinder output from all 47 species
AMTR_s00168p00063100 evm_27.TU.AmTr_v1... Silicon efflux transporter LSI3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Als_g15844 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Als_g61142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25042.t1 Aspi01Gene25042 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32904.t1 Aspi01Gene32904 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32907.t1 Aspi01Gene32907 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32908.t1 Aspi01Gene32908 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32803 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g38733 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G021700.1 Ceric.07G021700 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G017100.1 Ceric.13G017100 putative silicon efflux transporter *(LSI2) & original... 0.05 OrthoFinder output from all 47 species
Dac_g14147 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Dac_g39943 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g13476 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Dde_g13050 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g28975 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Gb_28693 No alias putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
LOC_Os02g57620.1 LOC_Os02g57620 putative silicon efflux transporter (LSI2) 0.04 OrthoFinder output from all 47 species
LOC_Os03g01700.1 LOC_Os03g01700 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39980.1 LOC_Os10g39980 putative silicon efflux transporter (LSI2) 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006251 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018482 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Smo98013 No alias Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Solyc03g025350.3.1 Solyc03g025350 putative silicon efflux transporter (LSI2) 0.05 OrthoFinder output from all 47 species
Spa_g11339 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.04 OrthoFinder output from all 47 species
Zm00001e002282_P001 Zm00001e002282 putative silicon efflux transporter (LSI2) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 27 472
No external refs found!