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  5. Zm00001e023352_P004

Zm00001e023352_P004 (Zm00001e023352)


Aliases : Zm00001e023352

Description : RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG0002854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023352_P004
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00106780 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Cre12.g532600 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g01714 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g21456 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Gb_09990 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species
Mp6g20270.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species
Pir_g05714 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.02 OrthoFinder output from all 47 species
Solyc12g009610.2.1 Solyc12g009610 RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species
Spa_g16271 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Tin_g05182 No alias Rab GTPase-activaTing protein *(RabGAP21) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 375 603
IPR021935 SGSM1/2_RBD 55 202
No external refs found!