LOC_Os03g55610 (Os03g0764900)


Aliases : Os03g0764900

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family A member of the DOF transcription factors. Prominently expressed in the phloem of leaves and other organs. Expression is induced by wounding, MeJA and insect feeding. Upregulates glucosinolate biosynthesis. OBP2


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g55610
Cluster HCCA cluster: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.03 Gene family
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT3G50410 OBP1 OBF binding protein 1 0.02 Gene family
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.02 Gene family
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
GSVIVT01005057001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01016887001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01021086001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
GSVIVT01025119001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os01g09720 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os02g15350 Os02g0252400 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os03g60630 Os03g0821200 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os07g13260 Os07g0236700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
MA_18267g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_7537g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc01g096120.3.1 Solyc01g096120.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc02g065290.1.1 Solyc02g065290.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc02g077950.2.1 Solyc02g077950.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc02g077960.2.1 Solyc02g077960.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc02g090220.3.1 Solyc02g090220.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc03g082840.3.1 Solyc03g082840.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc03g112930.3.1 Solyc03g112930.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc03g121400.1.1 Solyc03g121400.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc06g071480.3.1 Solyc06g071480.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc06g076030.3.1 Solyc06g076030.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc10g009360.3.1 Solyc10g009360.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d006463 GRMZM2G064655 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d014198 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d017788 GRMZM2G140694 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d021591 GRMZM2G134545,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d030727 GRMZM2G123900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d033325 GRMZM2G045678 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.06 Gene family
Zm00001d034163 GRMZM2G108865 16.5.1.2.3 secondary... 0.07 Gene family
Zm00001d041549 GRMZM2G176063 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.06 Gene family
Zm00001d051577 GRMZM2G589696 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 78 132
No external refs found!