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  5. Zm00001e023141_P002

Zm00001e023141_P002 (Zm00001e023141)


Aliases : Zm00001e023141

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023141_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00209140 evm_27.TU.AmTr_v1... Vesicle-associated protein 2-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g023052 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Adi_g058676 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Adi_g080054 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Adi_g085923 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Adi_g102804 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Als_g49608 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Ceric.22G049200.1 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Dcu_g35384 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40140.1 LOC_Os10g40140 contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
Msp_g12102 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Smo438734 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g090910.3.1 PVA12, Solyc01g090910 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc08g007390.2.1 PVA12, Solyc08g007390 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 65 162
No external refs found!